Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC110964580Ankyrin repeat and SOCS box-containing 12a. (342 aa)    
Predicted Functional Partners:
pikfyve
Phosphoinositide kinase, FYVE finger containing.
    
  0.875
FIG4
FIG4 phosphoinositide 5-phosphatase.
    
  0.873
cdipt
CDP-diacylglycerol--inositol 3-phosphatidyltransferase.
    
  0.867
asb16
Ankyrin repeat and SOCS box containing 16.
  
 
0.839
lrrc20
Leucine rich repeat containing 20.
   
 0.748
LOC110951456
Oxysterol-binding protein; Belongs to the OSBP family.
    
 0.717
osbpl6
Oxysterol-binding protein; Belongs to the OSBP family.
    
 0.717
LOC110951405
Ankyrin repeat and SOCS box containing 10.
  
 
0.710
eloc
Elongin C paralog a; Belongs to the SKP1 family.
    
 0.710
lrrc14b
Leucine rich repeat containing 14B.
   
  
 0.704
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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