STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ptpn13Tyrosine-protein phosphatase non-receptor type 13; Regulates negatively FAS-induced apoptosis and NGFR-mediated pro-apoptotic signaling. (2359 aa)    
Predicted Functional Partners:
plekha2
Si:ch211-204d2.4.
    
 0.727
ENSAPOP00000014195
APC_N_CC domain-containing protein.
   
 
 0.702
LOC110951574
APC regulator of WNT signaling pathway 2.
   
 
 0.702
rapgef6
Rap guanine nucleotide exchange factor (GEF) 6.
    
 
 0.700
rapgef2
Rap guanine nucleotide exchange factor (GEF) 2.
    
 
 0.700
LOC110968242
PH domain-containing protein.
    
 0.690
LOC110957644
Pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1a.
    
  0.662
lrit1
Leucine-rich repeat, immunoglobulin-like and transmembrane domains 1b.
    
  0.656
lrit3
Info leucine-rich repeat, immunoglobulin-like and transmembrane domains 3a.
    
  0.656
LOC110963843
Leucine-rich repeat, immunoglobulin-like and transmembrane domains 1a.
    
  0.656
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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