Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC111587764Chimerin 1. (413 aa)    
Predicted Functional Partners:
cav2
Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.
     
 0.596
nck2
Cytoplasmic protein.
    
 0.524
nck1
NCK adaptor protein 1b.
    
 0.524
hemk1
HemK methyltransferase family member 1.
    
   0.501
CDC42
Cell division cycle 42.
    
 0.474
LOC111573839
Uncharacterized protein.
    
 0.474
RAC1
Rac family small GTPase 1.
    
 0.467
LOC111577589
Rac family small GTPase 2.
    
 0.467
rac3
Rac family small GTPase 3b.
    
 0.467
LOC111576185
Uncharacterized protein.
    
 0.467
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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