STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111587744Uncharacterized protein. (486 aa)    
Predicted Functional Partners:
ganab
Glucosidase, alpha; neutral AB; Belongs to the glycosyl hydrolase 31 family.
   
 0.995
prkcsh
Protein kinase C substrate 80K-H.
  
  
 
0.905
gnptab
N-acetylglucosamine-1-phosphate transferase subunits alpha and beta.
    
 
 0.844
LOC111577316
Calmegin.
   
 0.727
canx
Calnexin.
   
 0.727
sec63
SEC63 homolog, protein translocation regulator.
   
  
 0.709
hsp90b1
Heat shock protein 90, beta (grp94), member 1.
   
 0.665
nagpa
N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase.
     
 0.561
p4hb
Protein disulfide-isomerase.
   
 0.549
LOC111584392
Protein disulfide-isomerase.
   
 0.549
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.