Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DMRTA1DMRT like family A1. (432 aa)    
Predicted Functional Partners:
med29
Mediator complex subunit 29.
    
 
 0.812
hoxc9
Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.
    
 
 0.735
kptn
Kaptin (actin binding protein).
    
 0.666
wdr24
WD repeat domain 24.
    
 0.654
skida1
SKI/DACH domain containing 1.
  
   
 0.623
depdc5
DEP domain containing 5.
   
 0.616
wdr59
WD repeat domain 59.
    
 0.605
ENSAOCP00000016926
Uncharacterized protein.
    
 0.555
SZT2
SZT2 subunit of KICSTOR complex.
    
 0.555
slc18b1
Solute carrier family 18 member B1.
      
 0.532
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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