STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bbs2Bardet-Biedl syndrome 2 protein homolog. (712 aa)    
Predicted Functional Partners:
bbs9
Bardet-Biedl syndrome 9.
   
 0.999
bbs7
Bardet-Biedl syndrome 7.
  
 0.999
bbs1
Bardet-Biedl syndrome 1.
   
 0.999
bbs4
Bardet-Biedl syndrome 4.
    
 0.999
ttc8
Tetratricopeptide repeat domain 8.
  
 
 0.999
lztfl1
Leucine zipper transcription factor-like 1.
    
 0.996
bbs5
Bardet-Biedl syndrome 5 protein homolog; Required for ciliogenesis; Belongs to the BBS5 family.
    
 0.995
ENSAOCP00000013804
BBSome interacting protein 1.
    
 0.965
bbs10
Uncharacterized protein; Belongs to the TCP-1 chaperonin family.
    
 0.937
klhl40
Kelch-like family member 40b.
    
 0.917
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.