Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC111574958Si:ch211-213o11.11; Belongs to the G-protein coupled receptor 1 family. (426 aa)    
Predicted Functional Partners:
LOC111586591
Uncharacterized protein; Belongs to the beta/gamma-crystallin family.
      
 0.553
fst
Follistatin a.
      
 0.423
gpr153
G protein-coupled receptor 153.
   
  
 0.422
LOC111567926
G protein-coupled estrogen receptor 1; Belongs to the G-protein coupled receptor 1 family.
     
 0.421
gprc5c
G protein-coupled receptor, class C, group 5, member C.
      
 0.408
LOC111564674
G_PROTEIN_RECEP_F3_4 domain-containing protein.
      
 0.408
rnf157
Ring finger protein 157.
    
 
 0.404
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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