LOC111563298 protein (Amphiprion ocellaris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LOC111563298

Serine/threonine kinase 17b (apoptosis-inducing); Belongs to the protein kinase superfamily. (357 aa)

Predicted Functional Partners:

tmem101

0.557

ENSAOCP00000012574

0.509

ENSAOCP00000000550

0.494

nme5

0.472

elp2

0.451

cdc7

0.421

rprd1a

0.416

ENSAOCP00000019794

0.416

LOC111566727

0.406

LOC111562407

0.402

Your Current Organism:

Amphiprion ocellaris

NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSAOCP00000000550	LOC111563298	ENSAOCP00000000550	ENSAOCP00000000087	Protein kinase domain-containing protein.	Serine/threonine kinase 17b (apoptosis-inducing); Belongs to the protein kinase superfamily.	0.494
ENSAOCP00000012574	LOC111563298	ENSAOCP00000012574	ENSAOCP00000000087	Uncharacterized protein.	Serine/threonine kinase 17b (apoptosis-inducing); Belongs to the protein kinase superfamily.	0.509
ENSAOCP00000019794	LOC111563298	ENSAOCP00000019794	ENSAOCP00000000087	Transmembrane protein with EGF-like and two follistatin-like domains 2a.	Serine/threonine kinase 17b (apoptosis-inducing); Belongs to the protein kinase superfamily.	0.416
LOC111562407	LOC111563298	ENSAOCP00000009352	ENSAOCP00000000087	Transducer of ERBB2, 1a.	Serine/threonine kinase 17b (apoptosis-inducing); Belongs to the protein kinase superfamily.	0.402
LOC111563298	ENSAOCP00000000550	ENSAOCP00000000087	ENSAOCP00000000550	Serine/threonine kinase 17b (apoptosis-inducing); Belongs to the protein kinase superfamily.	Protein kinase domain-containing protein.	0.494
LOC111563298	ENSAOCP00000012574	ENSAOCP00000000087	ENSAOCP00000012574	Serine/threonine kinase 17b (apoptosis-inducing); Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.509
LOC111563298	ENSAOCP00000019794	ENSAOCP00000000087	ENSAOCP00000019794	Serine/threonine kinase 17b (apoptosis-inducing); Belongs to the protein kinase superfamily.	Transmembrane protein with EGF-like and two follistatin-like domains 2a.	0.416
LOC111563298	LOC111562407	ENSAOCP00000000087	ENSAOCP00000009352	Serine/threonine kinase 17b (apoptosis-inducing); Belongs to the protein kinase superfamily.	Transducer of ERBB2, 1a.	0.402
LOC111563298	LOC111566727	ENSAOCP00000000087	ENSAOCP00000009395	Serine/threonine kinase 17b (apoptosis-inducing); Belongs to the protein kinase superfamily.	Solute carrier family 23 member 2.	0.406
LOC111563298	cdc7	ENSAOCP00000000087	ENSAOCP00000017745	Serine/threonine kinase 17b (apoptosis-inducing); Belongs to the protein kinase superfamily.	Cell division cycle 7 homolog (S. cerevisiae).	0.421
LOC111563298	elp2	ENSAOCP00000000087	ENSAOCP00000002197	Serine/threonine kinase 17b (apoptosis-inducing); Belongs to the protein kinase superfamily.	Elongator acetyltransferase complex subunit 2.	0.451
LOC111563298	nme5	ENSAOCP00000000087	ENSAOCP00000025188	Serine/threonine kinase 17b (apoptosis-inducing); Belongs to the protein kinase superfamily.	NME/NM23 family member 5; Belongs to the NDK family.	0.472
LOC111563298	rprd1a	ENSAOCP00000000087	ENSAOCP00000000764	Serine/threonine kinase 17b (apoptosis-inducing); Belongs to the protein kinase superfamily.	Regulation of nuclear pre-mRNA domain containing 1A.	0.416
LOC111563298	tmem101	ENSAOCP00000000087	ENSAOCP00000026362	Serine/threonine kinase 17b (apoptosis-inducing); Belongs to the protein kinase superfamily.	Transmembrane protein 101.	0.557
LOC111566727	LOC111563298	ENSAOCP00000009395	ENSAOCP00000000087	Solute carrier family 23 member 2.	Serine/threonine kinase 17b (apoptosis-inducing); Belongs to the protein kinase superfamily.	0.406
cdc7	LOC111563298	ENSAOCP00000017745	ENSAOCP00000000087	Cell division cycle 7 homolog (S. cerevisiae).	Serine/threonine kinase 17b (apoptosis-inducing); Belongs to the protein kinase superfamily.	0.421
elp2	LOC111563298	ENSAOCP00000002197	ENSAOCP00000000087	Elongator acetyltransferase complex subunit 2.	Serine/threonine kinase 17b (apoptosis-inducing); Belongs to the protein kinase superfamily.	0.451
nme5	LOC111563298	ENSAOCP00000025188	ENSAOCP00000000087	NME/NM23 family member 5; Belongs to the NDK family.	Serine/threonine kinase 17b (apoptosis-inducing); Belongs to the protein kinase superfamily.	0.472
rprd1a	LOC111563298	ENSAOCP00000000764	ENSAOCP00000000087	Regulation of nuclear pre-mRNA domain containing 1A.	Serine/threonine kinase 17b (apoptosis-inducing); Belongs to the protein kinase superfamily.	0.416
tmem101	LOC111563298	ENSAOCP00000026362	ENSAOCP00000000087	Transmembrane protein 101.	Serine/threonine kinase 17b (apoptosis-inducing); Belongs to the protein kinase superfamily.	0.557