STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc39a13Solute carrier family 39 member 13. (382 aa)    
Predicted Functional Partners:
slc30a4
Solute carrier family 30 member 4.
   
 0.675
LOC111562992
Uncharacterized protein.
      
 0.674
slc30a6
Solute carrier family 30 member 6.
   
 0.637
slc30a5
Solute carrier family 30 member 5.
   
 0.635
slc30a7
Solute carrier family 30 member 7.
   
 0.632
slc39a9
Solute carrier family 39 member 9.
    
 
 0.600
SLC39A11
Solute carrier family 39 member 11.
      
 0.588
slc30a9
Solute carrier family 30 member 9.
     
 0.559
bms1
BMS1 ribosome biogenesis factor.
      
 0.558
LOC111580653
DEAD (Asp-Glu-Ala-Asp) box polypeptide 52.
      
 0.557
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.