Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
slc39a13Solute carrier family 39 member 13. (382 aa)    
Predicted Functional Partners:
LOC111562992
Uncharacterized protein.
      
 0.917
slc30a4
Solute carrier family 30 member 4.
   
 0.808
slc39a9
Solute carrier family 39 member 9.
    
 
 0.801
slc30a6
Solute carrier family 30 member 6.
   
 0.775
slc30a5
Solute carrier family 30 member 5.
   
 0.773
slc30a7
Solute carrier family 30 member 7.
   
 0.751
bms1
BMS1 ribosome biogenesis factor.
      
 0.705
SLC39A11
Solute carrier family 39 member 11.
      
 0.705
LOC111575088
Solute carrier family 30 member 2.
    
 
 0.698
LOC111580653
DEAD (Asp-Glu-Ala-Asp) box polypeptide 52.
      
 0.694
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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