Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
hgdHomogentisate 1,2-dioxygenase. (443 aa)    
Predicted Functional Partners:
LOC111581380
4-hydroxyphenylpyruvate dioxygenase.
  
 0.997
LOC111567940
4-hydroxyphenylpyruvate dioxygenase.
  
 0.997
gstz1
Glutathione S-transferase zeta 1; Belongs to the GST superfamily.
 
 
 0.996
hpdl
4-hydroxyphenylpyruvate dioxygenase.
  
 0.982
fah
Fumarylacetoacetase.
  
 
 0.920
pah
Phenylalanine hydroxylase.
  
  
 0.875
LOC111576131
Glutathione S-transferase rho; Belongs to the GST superfamily.
  
 
 0.874
LOC111576124
Glutathione S-transferase rho; Belongs to the GST superfamily.
  
 
 0.874
tat
Tyrosine aminotransferase; Transaminase involved in tyrosine breakdown. Converts tyrosine to p-hydroxyphenylpyruvate.
   
  
 0.810
LOC111578292
Tryptophan hydroxylase 2 (tryptophan 5-monooxygenase).
  
  
 0.762
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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