Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
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[Homology]
Score
LOC111563299HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2a. (1522 aa)    
Predicted Functional Partners:
rps27a
Ribosomal protein S27a.
    
  0.747
LOC111575124
Angiomotin.
    
 0.674
ENSAOCP00000017694
Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.
    
 0.646
wbp2
WW domain binding protein 2.
    
 
 0.632
psma2
Proteasome subunit alpha type.
    
 0.623
smad6
Mothers against decapentaplegic homolog.
    
 0.614
smad7
Mothers against decapentaplegic homolog.
    
 0.614
LOC111565279
Mothers against decapentaplegic homolog.
    
 0.614
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.603
LOC111566873
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.603
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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