Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
pik3c3Phosphatidylinositol 3-kinase catalytic subunit type 3. (696 aa)    
Predicted Functional Partners:
pik3r4
Phosphoinositide-3-kinase, regulatory subunit 4.
   
 0.999
becn1
Beclin 1, autophagy related.
    
 0.997
atg14
Autophagy related 14.
    
 0.994
ENSAOCP00000013900
NRBF2_MIT domain-containing protein.
    
 0.992
uvrag
UV radiation resistance associated gene.
   
 0.986
cdipt
CDP-diacylglycerol--inositol 3-phosphatidyltransferase.
   
 
 0.974
LOC111578364
RAB5A, member RAS oncogene family, a.
    
 0.962
LOC111566728
Uncharacterized protein.
    
 0.962
LOC111566129
RAB5A, member RAS oncogene family, b.
    
 0.962
LOC111584799
RAB5C, member RAS oncogene family.
    
 0.962
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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