STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pik3c3Phosphatidylinositol 3-kinase catalytic subunit type 3. (696 aa)    
Predicted Functional Partners:
becn1
Beclin 1, autophagy related.
    
 0.997
pik3r4
Phosphoinositide-3-kinase, regulatory subunit 4.
   
 0.997
atg14
Autophagy related 14.
    
 0.976
uvrag
UV radiation resistance associated gene.
    
 0.975
cdipt
CDP-diacylglycerol--inositol 3-phosphatidyltransferase.
   
 
 0.968
LOC111581219
Uncharacterized protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
   
 
 0.968
LOC111578364
RAB5A, member RAS oncogene family, a.
    
 0.957
LOC111563727
RAB5B, member RAS oncogene family.
    
 0.957
LOC111566728
Uncharacterized protein.
    
 0.957
LOC111566129
RAB5A, member RAS oncogene family, b.
    
 0.957
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.