Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAOCP00000001000Uncharacterized protein. (261 aa)    
Predicted Functional Partners:
LOC111585014
Intersectin 2b.
    
 0.791
ENSAOCP00000012646
Uncharacterized protein.
    
 0.791
ENSAOCP00000016650
EH domain-containing protein.
    
 0.791
LOC111574951
Uncharacterized protein.
    
 0.791
ENSAOCP00000021205
Uncharacterized protein.
    
 0.791
ENSAOCP00000021220
DH domain-containing protein.
    
 0.791
dock4
Dedicator of cytokinesis 4b; Belongs to the DOCK family.
   
 0.691
itsn1
Intersectin 1 (SH3 domain protein).
    
 0.683
LOC111569033
Uncharacterized protein.
    
 0.655
ENSAOCP00000008588
Protein kinase domain-containing protein.
    
 0.655
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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