LOC111563193 protein (Amphiprion ocellaris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LOC111563193

Glycogen synthase kinase 3 alpha a; Belongs to the protein kinase superfamily. (438 aa)

Predicted Functional Partners:

ctnnb1

0.936

apc2

0.835

ENSAOCP00000026392

0.835

LOC111587652

0.823

axin1

0.823

LOC111566522

0.811

AXIN2

0.811

fbxw11

0.808

traf6

0.803

LOC111582920

0.797

Your Current Organism:

Amphiprion ocellaris

NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AXIN2	ENSAOCP00000026392	ENSAOCP00000018219	ENSAOCP00000026392	Axin 2.	APC_N_CC domain-containing protein.	0.827
AXIN2	LOC111563193	ENSAOCP00000018219	ENSAOCP00000001005	Axin 2.	Glycogen synthase kinase 3 alpha a; Belongs to the protein kinase superfamily.	0.811
AXIN2	LOC111582920	ENSAOCP00000018219	ENSAOCP00000026884	Axin 2.	Uncharacterized protein.	0.748
AXIN2	apc2	ENSAOCP00000018219	ENSAOCP00000021357	Axin 2.	APC regulator of WNT signaling pathway 2.	0.982
AXIN2	ctnnb1	ENSAOCP00000018219	ENSAOCP00000014206	Axin 2.	Catenin (cadherin-associated protein), beta 1.	0.989
AXIN2	fbxw11	ENSAOCP00000018219	ENSAOCP00000011347	Axin 2.	F-box and WD repeat domain containing 11a.	0.751
ENSAOCP00000026392	AXIN2	ENSAOCP00000026392	ENSAOCP00000018219	APC_N_CC domain-containing protein.	Axin 2.	0.827
ENSAOCP00000026392	LOC111563193	ENSAOCP00000026392	ENSAOCP00000001005	APC_N_CC domain-containing protein.	Glycogen synthase kinase 3 alpha a; Belongs to the protein kinase superfamily.	0.835
ENSAOCP00000026392	LOC111566522	ENSAOCP00000026392	ENSAOCP00000008123	APC_N_CC domain-containing protein.	Axin 2 (conductin, axil).	0.827
ENSAOCP00000026392	LOC111582920	ENSAOCP00000026392	ENSAOCP00000026884	APC_N_CC domain-containing protein.	Uncharacterized protein.	0.830
ENSAOCP00000026392	LOC111587652	ENSAOCP00000026392	ENSAOCP00000019860	APC_N_CC domain-containing protein.	Uncharacterized protein.	0.833
ENSAOCP00000026392	axin1	ENSAOCP00000026392	ENSAOCP00000020057	APC_N_CC domain-containing protein.	Axin 1.	0.833
ENSAOCP00000026392	ctnnb1	ENSAOCP00000026392	ENSAOCP00000014206	APC_N_CC domain-containing protein.	Catenin (cadherin-associated protein), beta 1.	0.967
ENSAOCP00000026392	fbxw11	ENSAOCP00000026392	ENSAOCP00000011347	APC_N_CC domain-containing protein.	F-box and WD repeat domain containing 11a.	0.797
LOC111563193	AXIN2	ENSAOCP00000001005	ENSAOCP00000018219	Glycogen synthase kinase 3 alpha a; Belongs to the protein kinase superfamily.	Axin 2.	0.811
LOC111563193	ENSAOCP00000026392	ENSAOCP00000001005	ENSAOCP00000026392	Glycogen synthase kinase 3 alpha a; Belongs to the protein kinase superfamily.	APC_N_CC domain-containing protein.	0.835
LOC111563193	LOC111566522	ENSAOCP00000001005	ENSAOCP00000008123	Glycogen synthase kinase 3 alpha a; Belongs to the protein kinase superfamily.	Axin 2 (conductin, axil).	0.811
LOC111563193	LOC111582920	ENSAOCP00000001005	ENSAOCP00000026884	Glycogen synthase kinase 3 alpha a; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.797
LOC111563193	LOC111587652	ENSAOCP00000001005	ENSAOCP00000019860	Glycogen synthase kinase 3 alpha a; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.823
LOC111563193	apc2	ENSAOCP00000001005	ENSAOCP00000021357	Glycogen synthase kinase 3 alpha a; Belongs to the protein kinase superfamily.	APC regulator of WNT signaling pathway 2.	0.835