STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111563193Glycogen synthase kinase 3 alpha a; Belongs to the protein kinase superfamily. (438 aa)    
Predicted Functional Partners:
ctnnb1
Catenin (cadherin-associated protein), beta 1.
    
 0.954
apc2
APC regulator of WNT signaling pathway 2.
    
 0.873
ENSAOCP00000026392
APC_N_CC domain-containing protein.
    
 0.873
nfe2l2
Nuclear factor, erythroid 2-like 2a.
    
 0.870
csnk1a1
Casein kinase 1, alpha 1; Belongs to the protein kinase superfamily.
   
 0.870
fbxw11
F-box and WD repeat domain containing 11a.
    
 0.867
LOC111587652
Uncharacterized protein.
   
 0.851
axin1
Axin 1.
   
 0.851
prune1
Prune exopolyphosphatase.
    
 
 0.850
LOC111566522
Axin 2 (conductin, axil).
   
 0.837
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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