Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAOCP00000001015Si:cabz01007807.1. (262 aa)    
Predicted Functional Partners:
fancm
Helicase C-terminal domain-containing protein.
    
 0.466
ENSAOCP00000002808
Helicase ATP-binding domain-containing protein.
    
 0.466
LOC111567737
Fatty acid binding protein 10a, liver basic.
      
 0.431
LOC111576741
Bicaudal C homolog 2.
      
 0.424
bicc1
BicC family RNA binding protein 1a.
      
 0.424
pltp
Phospholipid transfer protein.
     
 0.412
ENSAOCP00000010141
Mitogen-activated protein kinase kinase kinase 19.
    
 
 0.410
ogfod1
2-oxoglutarate and iron-dependent oxygenase domain containing 1.
      
 0.401
lin52
Lin-52 DREAM MuvB core complex component.
    
 0.400
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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