STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC111581365Uncharacterized protein. (1488 aa)    
Predicted Functional Partners:
robo1
Roundabout, axon guidance receptor, homolog 1 (Drosophila).
   
 0.763
robo4
Roundabout, axon guidance receptor, homolog 4 (Drosophila).
   
 0.760
LOC111584324
Roundabout, axon guidance receptor, homolog 3 (Drosophila).
    
 0.739
robo2
Roundabout, axon guidance receptor, homolog 2 (Drosophila).
   
 0.731
LOC111571748
Uncharacterized protein.
   
 0.731
ENSAOCP00000003628
Ig-like domain-containing protein.
   
 0.713
LOC111565111
Uncharacterized protein.
   
 0.713
ENSAOCP00000011169
Uncharacterized protein.
   
 0.702
abl1
Tyrosine-protein kinase.
    
 0.644
abl2
Tyrosine-protein kinase.
    
 0.644
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.