Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
r3hcc1R3H domain and coiled-coil containing 1. (407 aa)    
Predicted Functional Partners:
svopl
SVOP-like.
      
 0.731
mocs1
Molybdenum cofactor synthesis 1.
      
 0.615
tsfm
Elongation factor Ts, mitochondrial; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.
    
   0.597
chmp7
Charged multivesicular body protein 7.
      
 0.593
ap1g1
AP-1 complex subunit gamma.
      
 0.587
ddx55
RNA helicase.
      
 0.543
nudt22
Nudix (nucleoside diphosphate linked moiety X)-type motif 22.
      
 0.514
yipf3
Protein YIPF.
      
 0.490
ENSAOCP00000025415
Yip1 domain family, member 3.
      
 0.490
dmap1
DNA methyltransferase 1 associated protein 1.
   
  
 0.483
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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