Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC111563195Zgc:91910. (76 aa)    
Predicted Functional Partners:
ccdc174
Coiled-coil domain containing 174.
      
 0.613
txndc5
Thioredoxin domain containing 5; Belongs to the protein disulfide isomerase family.
    
   0.538
abitram
Actin binding transcription modulator.
   
  
 0.505
wdyhv1
WDYHV motif containing 1.
      
 0.492
snrpg
Small nuclear ribonucleoprotein G.
   
   0.488
ccdc181
Coiled-coil domain containing 181.
      
 0.457
ENSAOCP00000006875
Uncharacterized protein.
      
 0.454
psma2
Proteasome subunit alpha type.
   
  
 0.421
rassf3
Ras association domain family member 3.
      
 0.412
ENSAOCP00000001019
Bone morphogenetic protein 8a.
      
 0.407
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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