STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DSTDystonin. (3851 aa)    
Predicted Functional Partners:
ENSAOCP00000020184
SH3 domain-containing protein.
 
     0.916
LOC111582920
Uncharacterized protein.
   
 0.758
LOC111566303
Junction plakoglobin a.
   
 0.758
LOC111579004
Desmocollin 2 like; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion.
   
 0.720
itgb4
Integrin beta.
   
 0.702
perp
P53 apoptosis effector related to pmp22.
   
 
 0.616
pkp2
Plakophilin 2.
   
 0.582
ENSAOCP00000011621
Uncharacterized protein.
   
 0.565
sptan1
Spectrin alpha, non-erythrocytic 1.
   
 0.565
ctnnb1
Catenin (cadherin-associated protein), beta 1.
   
 0.547
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.