STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tax1bp1Tax1 (human T-cell leukemia virus type I) binding protein 1b. (840 aa)    
Predicted Functional Partners:
tnfaip3
Tumor necrosis factor, alpha-induced protein 3.
    
 0.989
gabarapl2
GABA(A) receptor-associated protein like 2.
   
 0.940
gabarap
GABA(A) receptor-associated protein b.
   
 0.940
LOC111568932
Zgc:92606.
   
  0.915
LOC111570277
Tax1 (human T-cell leukemia virus type I) binding protein 1a.
  
  
 
0.902
azi2
5-azacytidine induced 2.
    
 
 0.891
traf6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.809
tbk1
TANK-binding kinase 1.
    
 0.760
ikbke
Inhibitor of nuclear factor kappa B kinase subunit epsilon.
    
 0.712
cntn2
Contactin 2.
     
 0.671
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.