STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tax1bp1Tax1 (human T-cell leukemia virus type I) binding protein 1b. (840 aa)    
Predicted Functional Partners:
tnfaip3
Tumor necrosis factor, alpha-induced protein 3.
    
 0.999
nbr1
NBR1 autophagy cargo receptor a.
   
 0.996
sqstm1
Sequestosome 1.
   
 0.988
LOC111563087
Microtubule-associated protein 1 light chain 3 gamma.
   
 0.975
gabarapl2
GABA(A) receptor-associated protein like 2.
   
 0.971
gabarap
GABA(A) receptor-associated protein b.
   
 0.971
calcoco2
SKICH domain-containing protein.
    
0.970
traf6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.968
optn
Optineurin.
   
 0.967
LOC111583197
CD3e molecule, epsilon associated protein.
   
    0.962
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.