STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111578350FEV transcription factor, ETS family member. (213 aa)    
Predicted Functional Partners:
dao
D-amino-acid oxidase, tandem duplicate 2.
      
 0.589
hcrtr2
Hypocretin (orexin) receptor 2.
   
  
 0.583
rfx6
Regulatory factor X, 6.
   
  
 0.482
ddo
Zgc:172341.
      
 0.481
runx2
Runt-related transcription factor.
   
 0.417
ENSAOCP00000008932
Runt domain-containing protein.
   
 0.417
LOC111562778
Runt-related transcription factor.
   
 0.417
LOC111578471
Runt-related transcription factor.
   
 0.417
LOC111568308
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
      
 0.404
slc6a4
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
      
 0.404
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.