STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111563179Guanylate cyclase. (1091 aa)    
Predicted Functional Partners:
nudt2
Nudix (nucleoside diphosphate linked moiety X)-type motif 2.
     
  0.900
LOC111566107
Uncharacterized protein.
    
 0.872
nppc
Natriuretic peptide C.
    
 0.857
mocs1
Molybdenum cofactor synthesis 1.
   
 
 0.808
LOC111577902
GTP cyclohydrolase 2.
     
  0.800
PDE3A
Phosphodiesterase.
   
 0.767
LOC111582219
Phosphodiesterase.
   
 0.767
pde3b
Phosphodiesterase.
   
 0.767
pde5a
Phosphodiesterase.
   
 0.757
pde10a
Phosphodiesterase.
   
 0.731
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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