STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111577204Si:ch73-40a2.1. (914 aa)    
Predicted Functional Partners:
LOC111569909
Ephrin-A2a; Belongs to the ephrin family.
   
 0.763
LOC111573629
Ephrin RBD domain-containing protein; Belongs to the ephrin family.
   
 0.760
efna4
Si:dkey-246i14.3; Belongs to the ephrin family.
   
 0.746
LOC111584445
Ephrin-A1b; Belongs to the ephrin family.
   
 0.719
ENSAOCP00000004003
Ephrin-A5a; Belongs to the ephrin family.
   
 0.718
efna5
Ephrin RBD domain-containing protein; Belongs to the ephrin family.
   
 0.718
LOC111569208
Ephrin-A1a; Belongs to the ephrin family.
   
 0.707
EFNB1
Ephrin B1.
   
 0.684
ENSAOCP00000022237
Ephrin RBD domain-containing protein; Belongs to the ephrin family.
   
 0.684
efnb3
Ephrin-B3a; Belongs to the ephrin family.
   
 0.657
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.