Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC111585234Calpain 1, (mu/I) large subunit a; Belongs to the peptidase C2 family. (704 aa)    
Predicted Functional Partners:
ENSAOCP00000003814
Uncharacterized protein.
   
 0.770
LOC111576238
Zgc:153993.
   
 
 0.660
LOC111562459
Uncharacterized protein.
     
 0.656
bax
BCL2 associated X, apoptosis regulator a.
     
 0.656
capns1
Calpain, small subunit 1 b.
   
 0.643
ENSAOCP00000013121
EF-hand domain-containing protein.
   
 0.643
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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