Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAOCP00000001079Uncharacterized protein. (682 aa)    
Predicted Functional Partners:
ENSAOCP00000020152
Ion_trans_2 domain-containing protein.
 
      0.708
zmat3
Zinc finger, matrin-type 3.
   
  
 0.530
txndc12
Thioredoxin domain containing 12 (endoplasmic reticulum).
      
 0.501
LOC111580689
FKBP prolyl isomerase like.
      
 0.437
Ncoa6
Nucleic_acid_bd domain-containing protein.
      
 0.436
morn5
MORN repeat containing 5.
   
  
 0.434
prr16
Proline rich 16.
      
 0.424
cog6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
      
 0.423
LRFN2
Leucine rich repeat and fibronectin type III domain containing 2.
    
 
 0.417
LOC111572597
Leucine rich repeat and fibronectin type III domain containing 2b.
    
 
 0.417
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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