STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fam234aFamily with sequence similarity 234 member A. (549 aa)    
Predicted Functional Partners:
nprl3
NPR3-like, GATOR1 complex subunit.
      
 0.711
luc7l
LUC7-like (S. cerevisiae).
      
 0.511
LOC111572695
Fibronectin type-III domain-containing protein.
  
     0.436
mgrn1
Mahogunin, ring finger 1b.
      
 0.431
cygb
GLOBIN domain-containing protein; Belongs to the globin family.
      
 0.415
CYGB
Cytoglobin; Belongs to the globin family.
      
 0.415
AANAT
Arylalkylamine N-acetyltransferase 1.
      
 0.414
LOC111570166
Zgc:158803.
      
 0.405
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.