Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ptprkProtein tyrosine phosphatase receptor type K. (1369 aa)    
Predicted Functional Partners:
fras1
Fraser extracellular matrix complex subunit 1.
   
 0.616
lypla2
Lysophospholipase 2.
      
 0.615
LOC111588455
Uncharacterized protein.
      
 0.587
LOC111567664
Uncharacterized protein.
   
  
 0.547
LOC111589139-2
SOGA family member 3a.
   
  
 0.547
ECHDC1
Ethylmalonyl-CoA decarboxylase 1; Belongs to the enoyl-CoA hydratase/isomerase family.
      
 0.543
themis2
Thymocyte selection associated family member 2.
   
 
 0.451
dusp23
Dual specificity phosphatase 23a.
    
 
 0.449
skap2
Src kinase associated phosphoprotein 2.
   
 
 0.425
ptprq
Protein tyrosine phosphatase receptor type Q.
    
 0.422
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.