Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC111580115Lymphoid-restricted membrane protein. (1509 aa)    
Predicted Functional Partners:
LOC111582472
SUN domain-containing protein.
    
 
 0.771
LOC111581010
SUN domain-containing protein.
    
 
 0.771
sun1
Sad1 and UNC84 domain containing 1.
    
 
 0.771
dhx16
DEAH (Asp-Glu-Ala-His) box polypeptide 16.
    
 0.684
LOC111579171
Marker of proliferation Ki-67.
   
 0.630
sass6
SAS-6 centriolar assembly protein.
    
 0.628
cfap45
Cilia and flagella associated protein 45.
    
 
 0.620
cnpy4
Canopy FGF signaling regulator 4.
      
 0.602
LOC111567816
CECR2 histone acetyl-lysine reader.
    
 0.581
ACSF3
Acyl-CoA synthetase family member 3.
    
 
 0.575
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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