Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC111577196Si:dkey-38p12.3. (1033 aa)    
Predicted Functional Partners:
ect2l
Coiled-coil domain containing 28A.
     
 0.468
CDC42
Cell division cycle 42.
    
 0.434
LOC111573839
Uncharacterized protein.
    
 0.434
LOC111580690
Uncharacterized protein.
    
 0.425
LOC111587485
Uncharacterized protein.
    
 0.425
LOC111568127
Uncharacterized protein.
    
 0.425
LOC111573843
Uncharacterized protein.
    
 0.425
RHOB
Ras homolog family member B.
    
 0.425
LOC111580357
Ras homolog family member Ca.
    
 0.425
LOC111570914
BTB (POZ) domain containing 11b.
      
 0.425
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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