Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ptprhProtein tyrosine phosphatase receptor type H. (1097 aa)    
Predicted Functional Partners:
ENSAOCP00000029043
Uncharacterized protein.
      
 0.616
KCNK12
Potassium two pore domain channel subfamily K member 12; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.
      
 0.615
flt3
Fms-related tyrosine kinase 3; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.
  
 0.545
LOC111564110
Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.
   
 0.539
ENSAOCP00000006374
Si:dkey-177p2.18.
      
 0.512
rpl13a
Ribosomal protein L13a; Belongs to the universal ribosomal protein uL13 family.
    
  0.512
asz1
Ankyrin repeat, SAM and basic leucine zipper domain containing 1.
    
 
 0.503
LOC111574952
Macrophage stimulating 1 receptor a.
    
 0.463
met
MET proto-oncogene, receptor tyrosine kinase.
    
 0.463
mst1r
Macrophage stimulating 1 receptor b.
    
 0.463
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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