Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAOCP00000001130Anterior gradient 1. (162 aa)    
Predicted Functional Partners:
agr2
Anterior gradient 2.
   
    0.938
bricd5
BRICHOS domain containing 5.
      
 0.792
TMX3
Thioredoxin related transmembrane protein 3.
      
 0.614
LOC111584726
Thioredoxin-related transmembrane protein 1.
      
 0.614
LOC111565125
Zona pellucida-like domain containing 1b.
      
 0.613
LOC111572724
Zona pellucida-like domain containing 1a.
      
 0.613
erp44
Endoplasmic reticulum protein 44.
      
 0.543
pdia5
Protein disulfide isomerase family A, member 5.
      
 0.516
noxo1
NADPH oxidase organizer 1a.
      
 0.510
LOC111588436
NADPH oxidase organizer 1b.
      
 0.510
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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