STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAOCP00000001130Anterior gradient 1. (162 aa)    
Predicted Functional Partners:
bricd5
BRICHOS domain containing 5.
      
 0.603
LOC111563177
Tectorin beta.
      
 0.581
LOC111565125
Zona pellucida-like domain containing 1b.
      
 0.507
LOC111572724
Zona pellucida-like domain containing 1a.
      
 0.507
agr2
Anterior gradient 2.
   
   
0.495
TMX3
Thioredoxin related transmembrane protein 3.
      
 0.437
LOC111584726
Thioredoxin-related transmembrane protein 1.
      
 0.437
CCDC170
Uncharacterized protein.
      
 0.403
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.