Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
kyKyphoscoliosis peptidase. (829 aa)    
Predicted Functional Partners:
gpn2
GPN-loop GTPase 2; Small GTPase required for proper localization of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family.
    
 0.715
LOC111588193
SplA/ryanodine receptor domain and SOCS box containing 3b.
      
 0.585
LOC111565359
SplA/ryanodine receptor domain and SOCS box containing 3a.
      
 0.585
wdr18
WD repeat domain 18.
   
 0.583
pes1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.577
ankrd29
Ankyrin repeat domain 29.
   
 0.569
tex10
Testis expressed 10.
   
 0.564
cep63
Centrosomal protein 63.
      
 0.544
znf827
Zinc finger protein 827.
   
 0.502
ryk
Receptor like tyrosine kinase.
      
 0.492
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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