STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
alox5Arachidonate 5-lipoxygenase a. (675 aa)    
Predicted Functional Partners:
LOC111580294
Cytochrome P450, family 4, subfamily F, polypeptide 3; Belongs to the cytochrome P450 family.
   
 0.919
LOC111581646
Leukotriene C4 synthase.
     
 0.917
PLA2G12B
Phospholipase A2 group XIIB.
    
 0.917
lta4h
Leukotriene A(4) hydrolase; Belongs to the peptidase M1 family.
     
 0.915
pla2g4a
Phospholipase A2.
   
 
 0.912
ptgs2
Prostaglandin-endoperoxide synthase 2b.
   
 
 0.912
LOC111580397
Prostaglandin-endoperoxide synthase 1.
   
 
 0.912
LOC111569804
EGF-like domain-containing protein.
   
 
 0.912
LOC111586157
PLA2c domain-containing protein.
     
 0.905
pla2g12a
Phospholipase A2, group XIIA.
    
  0.905
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.