Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
alox5Arachidonate 5-lipoxygenase a. (675 aa)    
Predicted Functional Partners:
MAPKAPK2
MAPK activated protein kinase 2; Belongs to the protein kinase superfamily.
     
  0.944
LOC111581646
Leukotriene C4 synthase.
   
 
 0.934
lta4h
Leukotriene A(4) hydrolase; Belongs to the peptidase M1 family.
     
 0.923
LOC111570982
Uncharacterized protein.
  
  
 
0.920
PLA2G12B
Phospholipase A2 group XIIB.
    
 0.916
ptgs2
Prostaglandin-endoperoxide synthase 2b.
     
 0.913
LOC111580397
Prostaglandin-endoperoxide synthase 1.
     
 0.912
LOC111569804
EGF-like domain-containing protein.
     
 0.912
ENSAOCP00000008204
PA2c domain-containing protein.
     
 0.910
LOC111580366
PA2c domain-containing protein.
     
 0.910
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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