STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cunh20orf194Si:ch211-194c3.5. (1047 aa)    
Predicted Functional Partners:
dynlt1
Dynein, light chain, Tctex-type 1.
    
 
 0.541
DYNLT3
Dynein, light chain, Tctex-type 3.
    
 
 0.538
LOC111573352
Dynein light chain Tctex-type 3.
    
 
 0.538
dynlrb1
Dynein light chain roadblock.
    
 
 0.508
DYNLRB2
Dynein light chain roadblock.
    
 
 0.508
dnal4
Dynein light chain.
    
 
 0.502
fam168a
Family with sequence similarity 168 member A.
   
  
 0.460
dnai2
Dynein, axonemal, intermediate chain 2b.
    
 
 0.445
nrip2
Nuclear receptor interacting protein 2.
      
 0.431
DNAI1
Dynein axonemal intermediate chain 1.
    
 
 0.414
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.