STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
dcun1d3DCN1-like protein. (325 aa)    
Predicted Functional Partners:
cul1
Cullin 1b; Belongs to the cullin family.
   
 0.983
rbx1
Ring-box 1, E3 ubiquitin protein ligase.
    
 0.969
cul2
Cullin 2; Belongs to the cullin family.
   
 0.962
CUL3
Cullin 3; Belongs to the cullin family.
   
 0.932
LOC111579028
CULLIN_2 domain-containing protein; Belongs to the cullin family.
   
 0.932
mvb12a
Uncharacterized protein.
      
 0.898
ube2m
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.890
ENSAOCP00000020247
Uncharacterized protein.
    
 0.890
ube2f
Ubiquitin-conjugating enzyme E2F (putative); Belongs to the ubiquitin-conjugating enzyme family.
    
 0.890
LOC111563030
CULLIN_2 domain-containing protein; Belongs to the cullin family.
   
 0.851
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.