STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fkbp14Peptidylprolyl isomerase. (211 aa)    
Predicted Functional Partners:
fblim1
Filamin binding LIM protein 1.
      
 0.547
efcab1
EF-hand calcium binding domain 1.
   
 
 0.514
LOC111585397
Eukaryotic translation initiation factor 1A X-linked b; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.
   
   0.483
rpf2
Ribosome production factor 2 homolog.
   
 
 0.471
gpatch3
G patch domain containing 3.
    
 
 0.451
xbp1
X-box binding protein 1.
   
 
 0.444
ptges3
Prostaglandin E synthase 3b (cytosolic).
   
 0.440
LOC111576522
Prostaglandin E synthase 3a (cytosolic).
   
 0.440
LOC111570460
Si:ch211-131k2.3.
   
 0.440
rptor
Regulatory associated protein of MTOR, complex 1.
    
 
 0.439
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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