Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SAMD9SAM domain-containing protein. (1398 aa)    
Predicted Functional Partners:
wdr6
WD repeat domain 6.
   
 
 0.631
ifih1
Interferon induced with helicase C domain 1.
   
 
 0.589
cul1
Cullin 1b; Belongs to the cullin family.
    
 0.517
skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
   
 0.516
cmpk2
Cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial.
  
  
 0.514
ENSAOCP00000024487
Uncharacterized protein.
    
 0.479
rsad2
Radical S-adenosyl methionine domain containing 2.
   
  
 0.477
TCERG1
Transcription elongation regulator 1.
   
  
 0.473
ENSAOCP00000004843
PA14 domain-containing protein.
      
 0.471
ndufaf2
NADH:ubiquinone oxidoreductase complex assembly factor 2.
      
 0.471
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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