Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC111574814Hemoglobin subunit epsilon 1; Belongs to the globin family. (147 aa)    
Predicted Functional Partners:
LOC111582410
Zgc:163057; Belongs to the globin family.
  
 
 
0.617
LOC111574812
GLOBIN domain-containing protein; Belongs to the globin family.
  
 
 
0.576
LOC111574811
GLOBIN domain-containing protein; Belongs to the globin family.
  
 
 
0.574
LOC111582402
Hemoglobin, alpha embryonic 5; Belongs to the globin family.
  
 
 
0.572
LOC111582400
Hemoglobin beta embryonic-2; Belongs to the globin family.
  
  
 
0.544
LOC111586929
Uncharacterized protein.
      
 0.543
ENSAOCP00000002065
Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.
   
 0.467
LOC111576353
Uncharacterized protein.
   
 0.467
dock4
Dedicator of cytokinesis 4b; Belongs to the DOCK family.
   
   0.451
rpl6
Ribosomal protein L6.
      
 0.448
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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