Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC111582616Non-specific serine/threonine protein kinase. (638 aa)    
Predicted Functional Partners:
nck2
Cytoplasmic protein.
    
 0.966
nck1
NCK adaptor protein 1b.
    
 0.966
raf1
Raf-1 proto-oncogene, serine/threonine kinase a.
   
 
0.937
map2k1
Mitogen-activated protein kinase kinase 1; Belongs to the protein kinase superfamily.
  
 
0.929
CDC42
Cell division cycle 42.
   
 0.927
LOC111573839
Uncharacterized protein.
   
 0.927
RAC1
Rac family small GTPase 1.
   
 0.868
LOC111585700
Cell division cycle 42, like.
   
 0.868
LOC111577589
Rac family small GTPase 2.
   
 0.868
LOC111571068
Uncharacterized protein.
   
 0.868
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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