Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
neurl4Neuralized E3 ubiquitin protein ligase 4. (1606 aa)    
Predicted Functional Partners:
mapk6
Mitogen-activated protein kinase 6.
    
 
 0.938
UBE3A
Ubiquitin-protein ligase E3A; E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and transfers it to its substrates.
    
 
 0.933
Cep97
Uncharacterized protein.
    
 
 0.930
LOC111581955
Uncharacterized protein.
    
 
 0.847
LOC111581091
Ubiquitin protein ligase E3A.
    
 
 0.847
ccp110
Uncharacterized protein.
    
 
 0.847
lrrc41
Uncharacterized protein.
     
 0.816
cep290
Centrosomal protein 290.
    
 
 0.806
ENSAOCP00000018043
Uncharacterized protein.
    
 0.757
elp5
Elongator acetyltransferase complex subunit 5.
      
 0.748
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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