STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111585224Mcf.2 cell line derived transforming sequence-like a. (1103 aa)    
Predicted Functional Partners:
CDC42
Cell division cycle 42.
    
 0.665
LOC111573839
Uncharacterized protein.
    
 0.665
LOC111580690
Uncharacterized protein.
    
 0.523
LOC111587485
Uncharacterized protein.
    
 0.523
LOC111568127
Uncharacterized protein.
    
 0.523
LOC111573843
Uncharacterized protein.
    
 0.523
RHOB
Ras homolog family member B.
    
 0.523
LOC111580357
Ras homolog family member Ca.
    
 0.523
LOC111580849
Uncharacterized protein.
    
 0.523
LOC111585700
Cell division cycle 42, like.
    
 0.521
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.