Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC111585226Calcium binding protein 39-like. (334 aa)    
Predicted Functional Partners:
stk11
Serine/threonine kinase 11; Belongs to the protein kinase superfamily.
    
 0.985
prkaa1
Non-specific serine/threonine protein kinase.
    
 0.963
prkaa2
Non-specific serine/threonine protein kinase.
    
 0.963
strada
STE20 related adaptor alpha.
    
 0.960
STRADB
STE20 related adaptor beta.
    
 0.960
LOC111577243
Calcium binding protein 39, like 1.
  
  
 
0.901
cab39
Calcium binding protein 39.
  
  
 
0.901
lrsam1
Leucine rich repeat and sterile alpha motif containing 1.
    
 
 0.794
LOC111565863
Serine/threonine kinase 24b (STE20 homolog, yeast).
   
 
 0.629
stk25
Serine/threonine kinase 25b.
   
 
 0.629
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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