Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
foxa2Forkhead box A2. (415 aa)    
Predicted Functional Partners:
tbxt
T-box transcription factor Tb.
    
 0.785
LOC111566975
T-box transcription factor Ta.
    
 0.785
gata6
GATA binding protein 6.
   
 0.773
gata4
GATA binding protein 4.
   
 0.772
ar
Androgen receptor.
   
 0.749
LOC111568069
Uncharacterized protein.
   
 0.749
mixl1
Mix paired-like homeobox.
   
 
 0.740
LOC111567830
SRY-box transcription factor 17.
    
 0.732
gata3
GATA binding protein 3.
    
 0.694
LOC111588783
GATA binding protein 2a.
    
 0.694
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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