STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAOCP00000001235Stabilin 1. (1623 aa)    
Predicted Functional Partners:
LOC111565998
SPARC-like 2.
     
 0.672
sparc
Secreted protein, acidic, cysteine-rich (osteonectin).
     
 0.672
LOC111579516
SPARC-like 1.
     
 0.576
LOC111564166
Link domain-containing protein.
   
 
 0.553
lyve1
Lymphatic vessel endothelial hyaluronic receptor 1a.
   
 
 0.553
mrvi1
Murine retrovirus integration site 1 homolog.
   
 
 0.553
LOC111586343
Receptor expression-enhancing protein.
      
 0.545
tsnare1
SynN domain-containing protein.
      
 0.542
chid1
Chitinase domain containing 1; Belongs to the glycosyl hydrolase 18 family.
      
 0.494
apob
Apolipoprotein Ba.
   
 
  0.485
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.