STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111581338Uncharacterized protein. (694 aa)    
Predicted Functional Partners:
LOC111565328
Zgc:55558.
   
 
  0.926
hras
HRas proto-oncogene, GTPase a.
   
 
  0.926
kras
V-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog.
   
 
  0.926
tyk2
Tyrosine-protein kinase.
   
 0.695
LOC111573731
Tyrosine-protein kinase.
   
 0.695
LOC111571538
Tyrosine-protein kinase.
   
 0.695
jak1
Tyrosine-protein kinase.
   
 0.695
jak3
Tyrosine-protein kinase.
   
 0.695
LOC111579643
Inositol polyphosphate phosphatase-like 1b.
   
 
  0.669
inppl1
Inositol polyphosphate phosphatase-like 1a.
   
 
  0.669
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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