STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111575524Si:ch211-103a14.5. (189 aa)    
Predicted Functional Partners:
LOC111575406
Guanylate cyclase.
   
 0.933
LOC111584162
Guanylate cyclase.
   
 0.930
guca1b
Guanylate cyclase activator 1B.
   
 
0.706
LOC111581525
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.
   
 
 0.684
LOC111568491
Guanylate kinase 1b.
   
  0.660
CASK
Uncharacterized protein; Belongs to the MAGUK family.
    
 0.659
LOC111575429
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
    
 0.659
LOC111588513
G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily.
   
 0.596
guk1
Guanylate kinase 1a.
   
  0.569
guf1
Translation factor GUF1, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner.
      
 0.524
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.