LOC111585227 protein (Amphiprion ocellaris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LOC111585227

Regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1. (392 aa)

Predicted Functional Partners:

ND4

0.520

ENSAOCP00000004571

0.502

ENSAOCP00000022539

0.502

ENSAOCP00000022560

0.502

zfand4

0.480

nek7

0.465

cdadc1

0.446

dph3

0.443

LOC111563626

0.432

pter

0.426

Your Current Organism:

Amphiprion ocellaris

NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSAOCP00000004571	ENSAOCP00000022539	ENSAOCP00000004571	ENSAOCP00000022539	Uncharacterized protein.	RanBD1 domain-containing protein.	0.475
ENSAOCP00000004571	ENSAOCP00000022560	ENSAOCP00000004571	ENSAOCP00000022560	Uncharacterized protein.	Uncharacterized protein.	0.475
ENSAOCP00000004571	LOC111585227	ENSAOCP00000004571	ENSAOCP00000001250	Uncharacterized protein.	Regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1.	0.502
ENSAOCP00000004571	ND4	ENSAOCP00000004571	ENSAOCP00000000011	Uncharacterized protein.	NADH-ubiquinone oxidoreductase chain 4; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	0.425
ENSAOCP00000004571	nek7	ENSAOCP00000004571	ENSAOCP00000004629	Uncharacterized protein.	NIMA-related kinase 7; Belongs to the protein kinase superfamily.	0.459
ENSAOCP00000022539	ENSAOCP00000004571	ENSAOCP00000022539	ENSAOCP00000004571	RanBD1 domain-containing protein.	Uncharacterized protein.	0.475
ENSAOCP00000022539	ENSAOCP00000022560	ENSAOCP00000022539	ENSAOCP00000022560	RanBD1 domain-containing protein.	Uncharacterized protein.	0.475
ENSAOCP00000022539	LOC111585227	ENSAOCP00000022539	ENSAOCP00000001250	RanBD1 domain-containing protein.	Regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1.	0.502
ENSAOCP00000022539	ND4	ENSAOCP00000022539	ENSAOCP00000000011	RanBD1 domain-containing protein.	NADH-ubiquinone oxidoreductase chain 4; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	0.425
ENSAOCP00000022539	nek7	ENSAOCP00000022539	ENSAOCP00000004629	RanBD1 domain-containing protein.	NIMA-related kinase 7; Belongs to the protein kinase superfamily.	0.459
ENSAOCP00000022560	ENSAOCP00000004571	ENSAOCP00000022560	ENSAOCP00000004571	Uncharacterized protein.	Uncharacterized protein.	0.475
ENSAOCP00000022560	ENSAOCP00000022539	ENSAOCP00000022560	ENSAOCP00000022539	Uncharacterized protein.	RanBD1 domain-containing protein.	0.475
ENSAOCP00000022560	LOC111585227	ENSAOCP00000022560	ENSAOCP00000001250	Uncharacterized protein.	Regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1.	0.502
ENSAOCP00000022560	ND4	ENSAOCP00000022560	ENSAOCP00000000011	Uncharacterized protein.	NADH-ubiquinone oxidoreductase chain 4; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	0.425
ENSAOCP00000022560	nek7	ENSAOCP00000022560	ENSAOCP00000004629	Uncharacterized protein.	NIMA-related kinase 7; Belongs to the protein kinase superfamily.	0.459
LOC111563626	LOC111585227	ENSAOCP00000025235	ENSAOCP00000001250	Motilin receptor; Belongs to the G-protein coupled receptor 1 family.	Regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1.	0.432
LOC111585227	ENSAOCP00000004571	ENSAOCP00000001250	ENSAOCP00000004571	Regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1.	Uncharacterized protein.	0.502
LOC111585227	ENSAOCP00000022539	ENSAOCP00000001250	ENSAOCP00000022539	Regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1.	RanBD1 domain-containing protein.	0.502
LOC111585227	ENSAOCP00000022560	ENSAOCP00000001250	ENSAOCP00000022560	Regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1.	Uncharacterized protein.	0.502
LOC111585227	LOC111563626	ENSAOCP00000001250	ENSAOCP00000025235	Regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1.	Motilin receptor; Belongs to the G-protein coupled receptor 1 family.	0.432