Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC111576068Protein disulfide isomerase family A, member 8. (369 aa)    
Predicted Functional Partners:
hspa5
Heat shock protein 5; Belongs to the heat shock protein 70 family.
   
 0.930
LOC111583344
Ankyrin repeat domain 45.
   
 0.834
hsp90b1
Heat shock protein 90, beta (grp94), member 1.
   
 0.817
ero1b
Endoplasmic reticulum oxidoreductase beta.
   
 0.796
ero1a
Endoplasmic reticulum oxidoreductase alpha.
   
 0.796
LOC111577316
Calmegin.
   
 0.781
canx
Calnexin.
   
 0.781
LOC111563904
Calreticulin.
   
 0.771
LOC111575488
Calreticulin.
   
 0.771
LOC111564044
Calreticulin.
   
 0.771
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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