STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111586681CDC42 effector protein (Rho GTPase binding) 3. (359 aa)    
Predicted Functional Partners:
ENSAOCP00000030180
CDC42 effector protein (Rho GTPase binding) 5.
     
0.743
Rhoh
Ras homolog family member H.
    
 0.664
rhoq
Ras homolog family member Q.
    
 0.664
skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
      
 0.663
LOC111585434
Transmembrane protein 51b.
      
 0.487
LOC111570895
Transmembrane protein 51.
      
 0.487
LOC111564672
CDC42 effector protein (Rho GTPase binding) 4a.
     
0.447
cdc42ep4
CDC42 effector protein (Rho GTPase binding) 4b.
     
0.447
LOC111580821
CDC42 effector protein (Rho GTPase binding) 1b.
     
0.419
LOC111583665
WH2 domain-containing protein.
      
 0.418
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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