STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111576676Uncharacterized protein. (391 aa)    
Predicted Functional Partners:
snap47
Synaptosome associated protein 47.
      
 0.441
tekt3
Tektin 3.
      
 0.434
LOC111571402
Tissue factor pathway inhibitor.
      
 0.431
LOC111578884
Doublesex and mab-3 related transcription factor 1.
    
 
 0.429
rbbp8
CtIP_N domain-containing protein.
      
 0.422
LOC111583760
Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.
      
 0.418
LOC111569802
Claudin 11a.
      
 0.418
chmp2a
Charged multivesicular body protein 2A.
      
 0.418
ccdc47
Coiled-coil domain containing 47.
      
 0.414
heatr6
HEAT repeat containing 6.
      
 0.410
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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