LOC111576676 protein (Amphiprion ocellaris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

LOC111576676

Uncharacterized protein. (391 aa)

Predicted Functional Partners:

PLA2G12B

0.705

snap47

0.614

tekt3

0.612

rbbp8

0.612

LOC111573748

0.609

LOC111587526

0.609

dym

0.605

LOC111571402

0.601

katna1

0.559

LOC111568460

0.559

Your Current Organism:

Amphiprion ocellaris

NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC111568460	LOC111573748	ENSAOCP00000019408	ENSAOCP00000000295	Katanin p60 ATPase-containing subunit A1; Catalytic subunit of a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation.	Uncharacterized protein; Belongs to the potassium channel family.	0.434
LOC111568460	LOC111576676	ENSAOCP00000019408	ENSAOCP00000001258	Katanin p60 ATPase-containing subunit A1; Catalytic subunit of a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation.	Uncharacterized protein.	0.559
LOC111568460	LOC111587526	ENSAOCP00000019408	ENSAOCP00000022248	Katanin p60 ATPase-containing subunit A1; Catalytic subunit of a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation.	Potassium voltage-gated channel, subfamily G, member 4a; Belongs to the potassium channel family.	0.434
LOC111568460	PLA2G12B	ENSAOCP00000019408	ENSAOCP00000029334	Katanin p60 ATPase-containing subunit A1; Catalytic subunit of a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation.	Phospholipase A2 group XIIB.	0.521
LOC111571402	LOC111576676	ENSAOCP00000004316	ENSAOCP00000001258	Tissue factor pathway inhibitor.	Uncharacterized protein.	0.601
LOC111573748	LOC111568460	ENSAOCP00000000295	ENSAOCP00000019408	Uncharacterized protein; Belongs to the potassium channel family.	Katanin p60 ATPase-containing subunit A1; Catalytic subunit of a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation.	0.434
LOC111573748	LOC111576676	ENSAOCP00000000295	ENSAOCP00000001258	Uncharacterized protein; Belongs to the potassium channel family.	Uncharacterized protein.	0.609
LOC111573748	PLA2G12B	ENSAOCP00000000295	ENSAOCP00000029334	Uncharacterized protein; Belongs to the potassium channel family.	Phospholipase A2 group XIIB.	0.600
LOC111573748	katna1	ENSAOCP00000000295	ENSAOCP00000010356	Uncharacterized protein; Belongs to the potassium channel family.	Katanin p60 ATPase-containing subunit A1; Catalytic subunit of a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation.	0.434
LOC111576676	LOC111568460	ENSAOCP00000001258	ENSAOCP00000019408	Uncharacterized protein.	Katanin p60 ATPase-containing subunit A1; Catalytic subunit of a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation.	0.559
LOC111576676	LOC111571402	ENSAOCP00000001258	ENSAOCP00000004316	Uncharacterized protein.	Tissue factor pathway inhibitor.	0.601
LOC111576676	LOC111573748	ENSAOCP00000001258	ENSAOCP00000000295	Uncharacterized protein.	Uncharacterized protein; Belongs to the potassium channel family.	0.609
LOC111576676	LOC111587526	ENSAOCP00000001258	ENSAOCP00000022248	Uncharacterized protein.	Potassium voltage-gated channel, subfamily G, member 4a; Belongs to the potassium channel family.	0.609
LOC111576676	PLA2G12B	ENSAOCP00000001258	ENSAOCP00000029334	Uncharacterized protein.	Phospholipase A2 group XIIB.	0.705
LOC111576676	dym	ENSAOCP00000001258	ENSAOCP00000026221	Uncharacterized protein.	Dymeclin.	0.605
LOC111576676	katna1	ENSAOCP00000001258	ENSAOCP00000010356	Uncharacterized protein.	Katanin p60 ATPase-containing subunit A1; Catalytic subunit of a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation.	0.559
LOC111576676	rbbp8	ENSAOCP00000001258	ENSAOCP00000023811	Uncharacterized protein.	CtIP_N domain-containing protein.	0.612
LOC111576676	snap47	ENSAOCP00000001258	ENSAOCP00000015768	Uncharacterized protein.	Synaptosome associated protein 47.	0.614
LOC111576676	tekt3	ENSAOCP00000001258	ENSAOCP00000001087	Uncharacterized protein.	Tektin 3.	0.612
LOC111587526	LOC111568460	ENSAOCP00000022248	ENSAOCP00000019408	Potassium voltage-gated channel, subfamily G, member 4a; Belongs to the potassium channel family.	Katanin p60 ATPase-containing subunit A1; Catalytic subunit of a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation.	0.434